reviewInternational Journal of ProteomicsFeb 17, 2014HYBRID OA

Protein-Protein Interaction Detection: Methods and Analysis

Siddhartha Medical College · Mahatma Gandhi Institute of Technology · +1 more institution

PubMed
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Abstract

Protein-protein interaction plays key role in predicting the protein function of target protein and drug ability of molecules. The majority of genes and proteins realize resulting phenotype functions as a set of interactions. The in vitro and in vivo methods like affinity purification, Y2H (yeast 2 hybrid), TAP (tandem affinity purification), and so forth have their own limitations like cost, time, and so forth, and the resultant data sets are noisy and have more false positives to annotate the function of drug molecules. Thus, in silico methods which include sequence-based approaches, structure-based approaches, chromosome proximity, gene fusion, in silico 2 hybrid, phylogenetic tree, phylogenetic profile,…

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Authors

4

Topics & keywords

Keywords
  • In silico
  • Computational biology
  • Protein–protein interaction
  • Two-hybrid screening
  • Tandem affinity purification
  • False positive paradox
  • Function (biology)
  • Protein function prediction
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