articleNucleic Acids ResearchNov 1, 2008GOLD OA

SMART 6: recent updates and new developments

ILIvica LetunićTDTobias DoerksPBPeer Bork

European Molecular Biology Organization

PubMed
Indexed incrossrefdatacitedoajpubmed

Abstract

Simple modular architecture research tool (SMART) is an online tool (http://smart.embl.de/) for the identification and annotation of protein domains. It provides a user-friendly platform for the exploration and comparative study of domain architectures in both proteins and genes. The current release of SMART contains manually curated models for 784 protein domains. Recent developments were focused on further data integration and improving user friendliness. The underlying protein database based on completely sequenced genomes was greatly expanded and now includes 630 species, compared to 191 in the previous release. As an initial step towards integrating information on biological pathways into SMART, our…

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960
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3

Topics & keywords

Topics
Keywords
  • Annotation
  • Biology
  • Modular design
  • Computer science
  • Domain (mathematical analysis)
  • Identification (biology)
  • Web service
  • Computational biology
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