ESPript/ENDscript: extracting and rendering sequence and 3D information from atomic structures of proteins
Université Claude Bernard Lyon 1 · Centre National de la Recherche Scientifique · +1 more institution
Abstract
The fortran program ESPript was created in 1993, to display on a PostScript figure multiple sequence alignments adorned with secondary structure elements. A web server was made available in 1999 and ESPript has been linked to three major web tools: ProDom which identifies protein domains, PredictProtein which predicts secondary structure elements and NPS@ which runs sequence alignment programs. A web server named ENDscript was created in 2002 to facilitate the generation of ESPript figures containing a large amount of information. ENDscript uses programs such as BLAST, Clustal and PHYLODENDRON to work on protein sequences and such as DSSP, CNS and MOLSCRIPT to work on protein coordinates. It enables the…
Citation impact
- FWCI
- 18.06
- Percentile
- 100%
- References
- 22
Authors
1Topics & keywords
- Biology
- Rendering (computer graphics)
- Protein secondary structure
- Sequence (biology)
- Web server
- Sequence alignment
- Threading (protein sequence)
- Multiple sequence alignment