Global genomic and transcriptomic analysis of human pancreatic islets reveals novel genes influencing glucose metabolism

Lund University · Skåne University Hospital · +2 more institutions

PubMed
Indexed incrossrefpubmed

Abstract

Genetic variation can modulate gene expression, and thereby phenotypic variation and susceptibility to complex diseases such as type 2 diabetes (T2D). Here we harnessed the potential of DNA and RNA sequencing in human pancreatic islets from 89 deceased donors to identify genes of potential importance in the pathogenesis of T2D. We present a catalog of genetic variants regulating gene expression (eQTL) and exon use (sQTL), including many long noncoding RNAs, which are enriched in known T2D-associated loci. Of 35 eQTL genes, whose expression differed between normoglycemic and hyperglycemic individuals, siRNA of tetraspanin 33 (TSPAN33), 5'-nucleotidase, ecto (NT5E), transmembrane emp24 protein transport domain…

Citation impact

538
total citations
FWCI
36.66
Percentile
100%
References
66
Citations per year

Authors

23

Topics & keywords

Keywords
  • Biology
  • Expression quantitative trait loci
  • Pancreatic islets
  • Gene
  • Genetics
  • Regulation of gene expression
  • Gene expression
  • Glucose homeostasis
UN Sustainable Development Goals
  • Good health and well-being
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