Global genomic and transcriptomic analysis of human pancreatic islets reveals novel genes influencing glucose metabolism
Lund University · Skåne University Hospital · +2 more institutions
Abstract
Genetic variation can modulate gene expression, and thereby phenotypic variation and susceptibility to complex diseases such as type 2 diabetes (T2D). Here we harnessed the potential of DNA and RNA sequencing in human pancreatic islets from 89 deceased donors to identify genes of potential importance in the pathogenesis of T2D. We present a catalog of genetic variants regulating gene expression (eQTL) and exon use (sQTL), including many long noncoding RNAs, which are enriched in known T2D-associated loci. Of 35 eQTL genes, whose expression differed between normoglycemic and hyperglycemic individuals, siRNA of tetraspanin 33 (TSPAN33), 5'-nucleotidase, ecto (NT5E), transmembrane emp24 protein transport domain…
Citation impact
- FWCI
- 36.66
- Percentile
- 100%
- References
- 66
Authors
23- JFJoão FadistaCorresponding
Lund University, Skåne University Hospital
- PVPetter Vikman
Lund University, Skåne University Hospital
- EOEmilia Ottosson Laakso
Lund University, Skåne University Hospital
- IGInês G. Mollet
Lund University, Skåne University Hospital
- JLJonathan L.S. Esguerra
Lund University, Skåne University Hospital
Topics & keywords
- Biology
- Expression quantitative trait loci
- Pancreatic islets
- Gene
- Genetics
- Regulation of gene expression
- Gene expression
- Glucose homeostasis
- Good health and well-being