The oyster genome reveals stress adaptation and complexity of shell formation
Chinese Academy of Sciences · Institute of Oceanology · +13 more institutions
Abstract
The Pacific oyster Crassostrea gigas belongs to one of the most species-rich but genomically poorly explored phyla, the Mollusca. Here we report the sequencing and assembly of the oyster genome using short reads and a fosmid-pooling strategy, along with transcriptomes of development and stress response and the proteome of the shell. The oyster genome is highly polymorphic and rich in repetitive sequences, with some transposable elements still actively shaping variation. Transcriptome studies reveal an extensive set of genes responding to environmental stress. The expansion of genes coding for heat shock protein 70 and inhibitors of apoptosis is probably central to the oyster’s adaptation to sessile life in the…
Citation impact
- FWCI
- 100.65
- Percentile
- 100%
- References
- 47
Authors
85- GZGuofan ZhangCorresponding
Chinese Academy of Sciences, Institute of Oceanology
- XFXiaodong Fang
BGI Group (China)
- XGXiming GuoCorresponding
Rutgers, The State University of New Jersey
- LLLi Li
Chinese Academy of Sciences, Institute of Oceanology
- RLRuibang Luo
BGI Group (China), Computer Algorithms for Medicine, University of Hong Kong
Topics & keywords
- Oyster
- Adaptation (eye)
- Genome
- Biology
- Evolutionary biology
- Computational biology
- Genetics
- Gene
- Life below water