Tn5 transposase and tagmentation procedures for massively scaled sequencing projects
Ludwig Cancer Research · Ludwig Cancer Research · +1 more institution
Abstract
Massively parallel DNA sequencing of thousands of samples in a single machine-run is now possible, but the preparation of the individual sequencing libraries is expensive and time-consuming. Tagmentation-based library construction, using the Tn5 transposase, is efficient for generating sequencing libraries but currently relies on undisclosed reagents, which severely limits development of novel applications and the execution of large-scale projects. Here, we present simple and robust procedures for Tn5 transposase production and optimized reaction conditions for tagmentation-based sequencing library construction. We further show how molecular crowding agents both modulate library lengths and enable efficient…
Citation impact
- FWCI
- —
- Percentile
- —
- References
- 19
Authors
6- SPSimone PicelliCorresponding
Ludwig Cancer Research
- ÅKÅsa K. Björklund
Ludwig Cancer Research, Karolinska Institutet, Ludwig Cancer Research
- BRBjörn Reinius
Ludwig Cancer Research, Karolinska Institutet, Ludwig Cancer Research
- SSSven Sagasser
Ludwig Cancer Research, Karolinska Institutet, Ludwig Cancer Research
- GWGösta Winberg
Ludwig Cancer Research, Karolinska Institutet, Ludwig Cancer Research
Topics & keywords
- Biology
- Massive parallel sequencing
- Transposase
- Oligonucleotide
- Single cell sequencing
- DNA sequencing
- Computational biology
- Sequencing by hybridization
- Industry, innovation and infrastructure