articleNucleic Acids ResearchJun 25, 2003BRONZE OA

SWISS-MODEL: an automated protein homology-modeling server

University of Basel

PubMed
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Abstract

SWISS-MODEL (http://swissmodel.expasy.org) is a server for automated comparative modeling of three-dimensional (3D) protein structures. It pioneered the field of automated modeling starting in 1993 and is the most widely-used free web-based automated modeling facility today. In 2002 the server computed 120 000 user requests for 3D protein models. SWISS-MODEL provides several levels of user interaction through its World Wide Web interface: in the 'first approach mode' only an amino acid sequence of a protein is submitted to build a 3D model. Template selection, alignment and model building are done completely automated by the server. In the 'alignment mode', the modeling process is based on a user-defined…

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Topics & keywords

Keywords
  • Workbench
  • Web server
  • Computer science
  • Homology modeling
  • User interface
  • Multiple sequence alignment
  • Sequence alignment
  • Biology
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