Molecular Markers and Selection for Complex Traits in Plants: Learning from the Last 20 Years

In the mid‐1980s, the development of abundant molecular markers, appropriate statistical procedures, and user‐friendly computer software that implemented these statistical procedures permitted the detection of molecular markers associated with quantitative trait loci (QTL) for complex traits. Marker‐assisted selection was then proposed as a means of exploiting markers linked to QTL to develop improved cultivars. But while thousands of marker‐trait associations have been reported for many traits in different plant species, far fewer examples of successfully exploiting mapped QTL have been reported in the literature. Key lessons learned from applying markers in plant breeding include the following: (i) the…