articleJournal of Chemical Theory and ComputationAug 25, 2009Closed access

Quantum Chemistry on Graphical Processing Units. 3. Analytical Energy Gradients, Geometry Optimization, and First Principles Molecular Dynamics

Stanford University

PubMed
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Abstract

We demonstrate that a video gaming machine containing two consumer graphical cards can outpace a state-of-the-art quad-core processor workstation by a factor of more than 180× in Hartree-Fock energy + gradient calculations. Such performance makes it possible to run large scale Hartree-Fock and Density Functional Theory calculations, which typically require hundreds of traditional processor cores, on a single workstation. Benchmark Born-Oppenheimer molecular dynamics simulations are performed on two molecular systems using the 3-21G basis set - a hydronium ion solvated by 30 waters (94 atoms, 405 basis functions) and an aspartic acid molecule solvated by 147 waters (457 atoms, 2014 basis functions). Our GPU…

Citation impact

971
total citations
FWCI
13.85
Percentile
100%
References
27
Citations per year

Authors

2

Topics & keywords

Keywords
  • Molecular dynamics
  • Energy minimization
  • Benchmark (surveying)
  • Computational science
  • Basis (linear algebra)
  • Hydronium
  • Computer science
  • Basis set
UN Sustainable Development Goals
  • Affordable and clean energy
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