iLOGP: A Simple, Robust, and Efficient Description of n -Octanol/Water Partition Coefficient for Drug Design Using the GB/SA Approach
SIB Swiss Institute of Bioinformatics · University Hospital of Lausanne · +2 more institutions
Abstract
The n-octanol/water partition coefficient (log Po/w) is a key physicochemical parameter for drug discovery, design, and development. Here, we present a physics-based approach that shows a strong linear correlation between the computed solvation free energy in implicit solvents and the experimental log Po/w on a cleansed data set of more than 17,500 molecules. After internal validation by five-fold cross-validation and data randomization, the predictive power of the most interesting multiple linear model, based on two GB/SA parameters solely, was tested on two different external sets of molecules. On the Martel druglike test set, the predictive power of the best model (N = 706, r = 0.64, MAE = 1.18, and RMSE =…
Citation impact
- FWCI
- 6.24
- Percentile
- 100%
- References
- 77
Authors
3Topics & keywords
- Partition coefficient
- Solvation
- Complement (music)
- Correlation coefficient
- Octanol
- Mathematics
- Partition (number theory)
- Quantitative structure–activity relationship