articleNucleic Acids ResearchOct 28, 2014GOLD OA

STRING v10: protein–protein interaction networks, integrated over the tree of life

SIB Swiss Institute of Bioinformatics · University of Zurich · +7 more institutions

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Abstract

The many functional partnerships and interactions that occur between proteins are at the core of cellular processing and their systematic characterization helps to provide context in molecular systems biology. However, known and predicted interactions are scattered over multiple resources, and the available data exhibit notable differences in terms of quality and completeness. The STRING database (http://string-db.org) aims to provide a critical assessment and integration of protein-protein interactions, including direct (physical) as well as indirect (functional) associations. The new version 10.0 of STRING covers more than 2000 organisms, which has necessitated novel, scalable algorithms for transferring…

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Authors

14

Topics & keywords

Keywords
  • Biology
  • String (physics)
  • Tree (set theory)
  • Tree of life (biology)
  • Computational biology
  • Protein–protein interaction
  • Genetics
  • Evolutionary biology
UN Sustainable Development Goals
  • Partnerships for the goals
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