articleNucleic Acids ResearchMay 16, 2008GOLD OA

GOEAST: a web-based software toolkit for Gene Ontology enrichment analysis

Chinese Academy of Sciences · State Key Laboratory of Plant Genomics · +1 more institution

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Abstract

Gene Ontology (GO) analysis has become a commonly used approach for functional studies of large-scale genomic or transcriptomic data. Although there have been a lot of software with GO-related analysis functions, new tools are still needed to meet the requirements for data generated by newly developed technologies or for advanced analysis purpose. Here, we present a Gene Ontology Enrichment Analysis Software Toolkit (GOEAST), an easy-to-use web-based toolkit that identifies statistically overrepresented GO terms within given gene sets. Compared with available GO analysis tools, GOEAST has the following improved features: (i) GOEAST displays enriched GO terms in graphical format according to their relationships…

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Authors

2

Topics & keywords

Keywords
  • Biology
  • Gene ontology
  • Software
  • Computational biology
  • Ontology
  • Set (abstract data type)
  • Computer science
  • Data mining
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