articleNucleic Acids ResearchDec 14, 2009GOLD OA

SoyBase, the USDA-ARS soybean genetics and genomics database

DGDavid GrantRTRex T. NelsonSBSteven B. CannonRCRandy C. Shoemaker

Iowa State University

PubMed
Indexed incrossrefdoajpubmed

Abstract

SoyBase, the USDA-ARS soybean genetic database, is a comprehensive repository for professionally curated genetics, genomics and related data resources for soybean. SoyBase contains the most current genetic, physical and genomic sequence maps integrated with qualitative and quantitative traits. The quantitative trait loci (QTL) represent more than 18 years of QTL mapping of more than 90 unique traits. SoyBase also contains the well-annotated 'Williams 82' genomic sequence and associated data mining tools. The genetic and sequence views of the soybean chromosomes and the extensive data on traits and phenotypes are extensively interlinked. This allows entry to the database using almost any kind of available…

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Topics & keywords

Topics
Keywords
  • Biology
  • Quantitative trait locus
  • Genomics
  • Trait
  • Genetics
  • Functional genomics
  • Phenotypic trait
  • Database
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