Complexity of chromatin folding is captured by the strings and binders switch model
Superconducting and other Innovative Materials and Devices Institute · Istituto Nazionale di Fisica Nucleare, Sezione di Napoli · +4 more institutions
Abstract
Chromatin has a complex spatial organization in the cell nucleus that serves vital functional purposes. A variety of chromatin folding conformations has been detected by single-cell imaging and chromosome conformation capture-based approaches. However, a unified quantitative framework describing spatial chromatin organization is still lacking. Here, we explore the "strings and binders switch" model to explain the origin and variety of chromatin behaviors that coexist and dynamically change within living cells. This simple polymer model recapitulates the scaling properties of chromatin folding reported experimentally in different cellular systems, the fractal state of chromatin, the processes of domain…
Citation impact
- FWCI
- 11.42
- Percentile
- 100%
- References
- 38
Authors
7- MBMariano BarbieriCorresponding
Superconducting and other Innovative Materials and Devices Institute, Istituto Nazionale di Fisica Nucleare, Sezione di Napoli
- MCMita Chotalia
Hammersmith Hospital, Imperial College London, Medical Research Council
- JAJames A. Fraser
McGill University
- LLLiron-Mark Lavitas
Hammersmith Hospital, Imperial College London, Medical Research Council
- JDJosée Dostie
McGill University
Topics & keywords
- Chromatin
- Folding (DSP implementation)
- Chromosome conformation capture
- Fractal
- Domain (mathematical analysis)
- Biological system
- Computer science
- Computational biology
- Life in Land