articleProceedings of the National Academy of SciencesSep 17, 2012BRONZE OA

Complexity of chromatin folding is captured by the strings and binders switch model

Superconducting and other Innovative Materials and Devices Institute · Istituto Nazionale di Fisica Nucleare, Sezione di Napoli · +4 more institutions

PubMed
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Abstract

Chromatin has a complex spatial organization in the cell nucleus that serves vital functional purposes. A variety of chromatin folding conformations has been detected by single-cell imaging and chromosome conformation capture-based approaches. However, a unified quantitative framework describing spatial chromatin organization is still lacking. Here, we explore the "strings and binders switch" model to explain the origin and variety of chromatin behaviors that coexist and dynamically change within living cells. This simple polymer model recapitulates the scaling properties of chromatin folding reported experimentally in different cellular systems, the fractal state of chromatin, the processes of domain…

Citation impact

630
total citations
FWCI
11.42
Percentile
100%
References
38
Citations per year

Authors

7

Topics & keywords

Keywords
  • Chromatin
  • Folding (DSP implementation)
  • Chromosome conformation capture
  • Fractal
  • Domain (mathematical analysis)
  • Biological system
  • Computer science
  • Computational biology
UN Sustainable Development Goals
  • Life in Land
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