OrganellarGenomeDRAW—a suite of tools for generating physical maps of plastid and mitochondrial genomes and visualizing expression data sets
Max Planck Institute of Molecular Plant Physiology · Max Planck Society
Abstract
Mitochondria and plastids (chloroplasts) are cell organelles of endosymbiotic origin that possess their own genetic information. Most organellar DNAs map as circular double-stranded genomes. Across the eukaryotic kingdom, organellar genomes display great size variation, ranging from ∼15 to 20 kb (the size of the mitochondrial genome in most animals) to >10 Mb (the size of the mitochondrial genome in some lineages of flowering plants). We have developed OrganellarGenomeDraw (OGDRAW), a suite of software tools that enable users to create high-quality visual representations of both circular and linear annotated genome sequences provided as GenBank files or accession numbers. Although all types of DNA sequences…
Citation impact
- FWCI
- 24.08
- Percentile
- 100%
- References
- 26
Authors
4- MLMarc LohseCorresponding
Max Planck Institute of Molecular Plant Physiology
- ODOliver Drechsel
Max Planck Institute of Molecular Plant Physiology, Max Planck Society
- SKSabine Kahlau
Max Planck Institute of Molecular Plant Physiology, Max Planck Society
- RBRalph Bock
Max Planck Society, Max Planck Institute of Molecular Plant Physiology
Topics & keywords
- Biology
- Genome
- Perl
- GenBank
- Plastid
- Mitochondrial DNA
- Computational biology
- Genetics