A global reference for human genetic variation
Albert Einstein College of Medicine · University of Michigan · +128 more institutions
Abstract
The 1000 Genomes Project set out to provide a comprehensive description of common human genetic variation by applying whole-genome sequencing to a diverse set of individuals from multiple populations. Here we report completion of the project, having reconstructed the genomes of 2,504 individuals from 26 populations using a combination of low-coverage whole-genome sequencing, deep exome sequencing, and dense microarray genotyping. We characterized a broad spectrum of genetic variation, in total over 88 million variants (84.7 million single nucleotide polymorphisms (SNPs), 3.6 million short insertions/deletions (indels), and 60,000 structural variants), all phased onto high-quality haplotypes. This resource…
Citation impact
- FWCI
- 888.48
- Percentile
- 100%
- References
- 40
Authors
815- CACorresponding authors
Albert Einstein College of Medicine
- AAAdam AutonCorresponding
Albert Einstein College of Medicine, University of Michigan
- GRGonçalo R. Abecasis
University of Michigan, Vertex Pharmaceuticals (United States)
- DMDavid M. Altshuler
Wellcome Sanger Institute, Vertex Pharmaceuticals (United States)
- RDRichard DurbinCorresponding
University of Michigan, Wellcome Sanger Institute
Topics & keywords
- 1000 Genomes Project
- Genome
- Biology
- Reference genome
- Genetic variation
- Exome sequencing
- Single-nucleotide polymorphism
- Genetics
Funding
- NSNational Science FoundationAwards: -1147470, WT098051, 1147470, DGE-1147470
- HHHoward Hughes Medical Institute
- APAlfred P. Sloan Foundation
- SFSimons Foundation
- MGMassachusetts General Hospital
- BCBoston College
- HUHarvard University
- LSLouisiana State University
- WTWellcome TrustAwards: 095552/Z/11/Z, 089276, WT095908, 095552, 090532, WT098051, 090532/Z/09/Z, 090532/Z/09/
- EMEuropean Molecular Biology Laboratory
- BIBroad Institute
- SFSimons Foundation Autism Research Initiative
- NINational Institute for Health and Care Research
- BHBritish Heart FoundationAward: 090532/Z/09/Z
- UOUniversity of OxfordAward: 090532/Z/09/Z
- DFDeutsche Forschungsgemeinschaft
- SNSchweizerischer Nationalfonds zur Förderung der Wissenschaftlichen ForschungAwards: 31003A_130342, WT098051
- NNNational Natural Science Foundation of ChinaAwards: 863 Program, 31161130357
- BFBundesministerium für Bildung und ForschungAwards: 01GS08201, 0316190A, 0315428A
- EWEwha Womans University
- GOGovernment of Jiangxi Province
- LLundbeckfonden
- MMax-Planck-Gesellschaft
- BÜBilkent Üniversitesi
- UDUniversité de Genève
- MDMinistero dello Sviluppo Economico
- HLH. Lundbeck A/S
- NINational Institutes of HealthAwards: R01CA172652, R01HL104608, R01GM104390, 1147470
- DFDirectorate for Biological Sciences
- CICanadian Institutes of Health Research
- FDFonds de Recherche du Québec - Santé
- MRMedical Research CouncilAwards: WT098051, 090532/Z/09/Z
- BABiotechnology and Biological Sciences Research CouncilAwards: BB/I021213/1, BB/I02593X/1
- JSJapan Society for the Promotion of ScienceAwards: PE13075, 10144
- IDInstituto de Salud Carlos IIIAwards: IPT13/0001-ISCIII-SGEFI/FEDER, PRB2 IPT13/0001
- NHNational High-tech Research and Development ProgramAward: 2012AA02A201
- NKNational Key Research and Development Program of ChinaAward: 2011CB809201, 2011CB809202
- OMOntario Ministry of Research and Innovation