articleNucleic Acids ResearchMay 8, 2009GOLD OA

QMEAN server for protein model quality estimation

University of Basel · SIB Swiss Institute of Bioinformatics

PubMed
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Abstract

Model quality estimation is an essential component of protein structure prediction, since ultimately the accuracy of a model determines its usefulness for specific applications. Usually, in the course of protein structure prediction a set of alternative models is produced, from which subsequently the most accurate model has to be selected. The QMEAN server provides access to two scoring functions successfully tested at the eighth round of the community-wide blind test experiment CASP. The user can choose between the composite scoring function QMEAN, which derives a quality estimate on the basis of the geometrical analysis of single models, and the clustering-based scoring function QMEANclust which calculates a…

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907
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Authors

3

Topics & keywords

Keywords
  • Ranking (information retrieval)
  • Data mining
  • CASP
  • Computer science
  • Set (abstract data type)
  • Cluster analysis
  • Web server
  • Quality (philosophy)
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