The Major Genetic Determinants of HIV-1 Control Affect HLA Class I Peptide Presentation
TIThe International HIV Controllers Study
Indexed incrossrefpubmed
Abstract
Infectious and inflammatory diseases have repeatedly shown strong genetic associations within the major histocompatibility complex (MHC); however, the basis for these associations remains elusive. To define host genetic effects on the outcome of a chronic viral infection, we performed genome-wide association analysis in a multiethnic cohort of HIV-1 controllers and progressors, and we analyzed the effects of individual amino acids within the classical human leukocyte antigen (HLA) proteins. We identified >300 genome-wide significant single-nucleotide polymorphisms (SNPs) within the MHC and none elsewhere. Specific amino acids in the HLA-B peptide binding groove, as well as an independent HLA-C effect, explain…
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Authors
1- TIThe International HIV Controllers StudyCorresponding
Topics & keywords
Topics
Keywords
- Human leukocyte antigen
- Affect (linguistics)
- Human immunodeficiency virus (HIV)
- Peptide
- Presentation (obstetrics)
- Immunology
- Genetics
- Biology
UN Sustainable Development Goals
- Good health and well-being
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Funding
- NSNational Science FoundationAward: HHSN261200800001E
- UDU.S. Department of Health and Human ServicesAward: HHSN261200800001E
- BABill and Melinda Gates Foundation
- HUHarvard University
- HUHarvard University Center for AIDS ResearchAwards: P-30-AI060354, AI060354
- SNSchweizerischer Nationalfonds zur Förderung der Wissenschaftlichen ForschungAwards: 108787, 33CSC0-108787, 110012
- CSChina Scholarship Council
- NINational Institutes of HealthAwards: UL1 RR024131, AI069428, AI069556, AI069501, AI069452, AI069450, AI069513, HHSN261200800001E, AI069423, AI069477, AI069532, AI68634, R24 AI067039, AI069434, AI069471, AI069502, AI069432, AI030914, AI069472, AI068636, RR024975, RR024131, AI069495, AI069424, AI069484, AI069474, AI069415, AI28568, AI069465, AI077505, AI060354, AI069511, AI069419
- CFCenter for AIDS Research, University of WashingtonAwards: P-30 AI27763, R24 AI067039
- UOUniversity of California, San FranciscoAward: UL1 RR024131
- NINational Institute of Mental HealthAwards: HHSN261200800001E, MH085520
- NCNational Cancer InstituteAward: UL1 RR024131