PDB-wide collection of binding data: current status of the PDBbind database
Macau University of Science and Technology · Chinese Academy of Sciences · +1 more institution
Abstract
MOTIVATION: Molecular recognition between biological macromolecules and organic small molecules plays an important role in various life processes. Both structural information and binding data of biomolecular complexes are indispensable for depicting the underlying mechanism in such an event. The PDBbind database was created to collect experimentally measured binding data for the biomolecular complexes throughout the Protein Data Bank (PDB). It thus provides the linkage between structural information and energetic properties of biomolecular complexes, which is especially desirable for computational studies or statistical analyses. RESULTS: Since its first public release in 2004, the PDBbind database has been…
Citation impact
- FWCI
- 8.68
- Percentile
- 100%
- References
- 43
Authors
9- ZLZhihai LiuCorresponding
Macau University of Science and Technology, Chinese Academy of Sciences, Shanghai Institute of Organic Chemistry
- YLYan Li
Macau University of Science and Technology, Chinese Academy of Sciences, Shanghai Institute of Organic Chemistry
- LHLi Han
Macau University of Science and Technology, Chinese Academy of Sciences, Shanghai Institute of Organic Chemistry
- JLJie Li
Macau University of Science and Technology, Chinese Academy of Sciences, Shanghai Institute of Organic Chemistry
- JLJie Liu
Macau University of Science and Technology, Chinese Academy of Sciences, Shanghai Institute of Organic Chemistry
Topics & keywords
- Protein Data Bank (RCSB PDB)
- Protein Data Bank
- Database
- Computer science
- Data mining
- Information retrieval
- Chemistry
- Protein structure
- Responsible consumption and production