Improved structure, function and compatibility for CellProfiler: modular high-throughput image analysis software
Broad Institute · University of Wisconsin–Madison
Abstract
UNLABELLED: There is a strong and growing need in the biology research community for accurate, automated image analysis. Here, we describe CellProfiler 2.0, which has been engineered to meet the needs of its growing user base. It is more robust and user friendly, with new algorithms and features to facilitate high-throughput work. ImageJ plugins can now be run within a CellProfiler pipeline. AVAILABILITY AND IMPLEMENTATION: CellProfiler 2.0 is free and open source, available at http://www.cellprofiler.org under the GPL v. 2 license. It is available as a packaged application for Macintosh OS X and Microsoft Windows and can be compiled for Linux. CONTACT: anne@broadinstitute.org SUPPLEMENTARY INFORMATION:…
Citation impact
- FWCI
- 45.47
- Percentile
- 100%
- References
- 17
Authors
10- LKLee KamentskyCorresponding
Broad Institute, University of Wisconsin–Madison
- TRThouis R. Jones
Broad Institute, University of Wisconsin–Madison
- AFAdam Fraser
Broad Institute, University of Wisconsin–Madison
- MBMark‐Anthony Bray
Broad Institute, University of Wisconsin–Madison
- DJDavid J. Logan
Broad Institute, University of Wisconsin–Madison
Topics & keywords
- Plug-in
- Computer science
- MIT License
- Software
- Pipeline (software)
- OS X
- Modular design
- License
- Industry, innovation and infrastructure