GenAlEx 6.5: genetic analysis in Excel. Population genetic software for teaching and research—an update
Rutgers, The State University of New Jersey · Australian National University
Abstract
SUMMARY: GenAlEx: Genetic Analysis in Excel is a cross-platform package for population genetic analyses that runs within Microsoft Excel. GenAlEx offers analysis of diploid codominant, haploid and binary genetic loci and DNA sequences. Both frequency-based (F-statistics, heterozygosity, HWE, population assignment, relatedness) and distance-based (AMOVA, PCoA, Mantel tests, multivariate spatial autocorrelation) analyses are provided. New features include calculation of new estimators of population structure: G'(ST), G''(ST), Jost's D(est) and F'(ST) through AMOVA, Shannon Information analysis, linkage disequilibrium analysis for biallelic data and novel heterogeneity tests for spatial autocorrelation analysis.…
Citation impact
- FWCI
- 386.44
- Percentile
- 100%
- References
- 26
Authors
2Topics & keywords
- Population
- Computer science
- Software
- Spatial analysis
- Statistics
- Autocorrelation
- Data mining
- Programming language