The EMBL-EBI bioinformatics web and programmatic tools framework
European Bioinformatics Institute · Wellcome Trust
Abstract
Since 2009 the EMBL-EBI Job Dispatcher framework has provided free access to a range of mainstream sequence analysis applications. These include sequence similarity search services (https://www.ebi. ac.uk/Tools/sss/) such as BLAST, FASTA and PSI-Search, multiple sequence alignment tools (https: //www.ebi.ac.uk/Tools/msa/) such as Clustal Omega, MAFFT and T-Coffee, and other sequence analysis tools (https://www.ebi.ac.uk/Tools/pfa/) such as InterProScan. Through these services users can search mainstream sequence databases such as ENA, UniProt and Ensembl Genomes, utilising a uniform web interface or systematically through Web Services interfaces (https://www.ebi.ac. uk/Tools/webservices/) using common…
Citation impact
- FWCI
- 72.58
- Percentile
- 100%
- References
- 39
Authors
9- WLWeizhong LiCorresponding
European Bioinformatics Institute, Wellcome Trust
- ACAndrew Cowley
Wellcome Trust, European Bioinformatics Institute
- MUMahmut Uludağ
Wellcome Trust, European Bioinformatics Institute
- TGTamer Gür
European Bioinformatics Institute, Wellcome Trust
- HMHamish McWilliam
Wellcome Trust, European Bioinformatics Institute
Topics & keywords
- Workflow
- UniProt
- Ensembl
- World Wide Web
- Web service
- Multiple sequence alignment
- Sequence alignment
- Biology