Species detection using environmental DNA from water samples
Centre National de la Recherche Scientifique · Université Joseph Fourier · +1 more institution
Abstract
The assessment of species distribution is a first critical phase of biodiversity studies and is necessary to many disciplines such as biogeography, conservation biology and ecology. However, several species are difficult to detect, especially during particular time periods or developmental stages, potentially biasing study outcomes. Here we present a novel approach, based on the limited persistence of DNA in the environment, to detect the presence of a species in fresh water. We used specific primers that amplify short mitochondrial DNA sequences to track the presence of a frog ( Rana catesbeiana ) in controlled environments and natural wetlands. A multi-sampling approach allowed for species detection in all…
Citation impact
- FWCI
- 12.43
- Percentile
- 100%
- References
- 22
Authors
4- GFGentile Francesco FicetolaCorresponding
Centre National de la Recherche Scientifique, Université Joseph Fourier, Laboratoire d'Écologie Alpine
- CMClaude Miaud
Centre National de la Recherche Scientifique, Laboratoire d'Écologie Alpine
- FPFrançois Pompanon
Centre National de la Recherche Scientifique, Université Joseph Fourier, Laboratoire d'Écologie Alpine
- PTPierre Taberlet
Centre National de la Recherche Scientifique, Université Joseph Fourier, Laboratoire d'Écologie Alpine
Topics & keywords
- Biology
- Environmental DNA
- Biodiversity
- Pyrosequencing
- Ecology
- Mitochondrial DNA
- DNA sequencing
- Metagenomics
- Life in Land