MAPPFinder: using Gene Ontology and GenMAPP to create a global gene-expression profile from microarray data
University of California, San Francisco · Gladstone Institutes · +3 more institutions
Abstract
MAPPFinder is a tool that creates a global gene-expression profile across all areas of biology by integrating the annotations of the Gene Ontology (GO) Project with the free software package GenMAPP http://www.GenMAPP.org . The results are displayed in a searchable browser, allowing the user to rapidly identify GO terms with over-represented numbers of gene-expression changes. Clicking on GO terms generates GenMAPP graphical files where gene relationships can be explored, annotated, and files can be freely exchanged.
Citation impact
- FWCI
- 34.32
- Percentile
- 100%
- References
- 19
Authors
6- SWScott W Doniger
University of California, San Francisco, Gladstone Institutes
- NSNathan Salomonis
University of California, San Francisco, Gladstone Institutes
- KDKam D Dahlquist
University of California, San Francisco, Gladstone Institutes
- KVKaren Vranizan
University of California, San Francisco, Innovative Genomics Institute, ID Genomics (United States), Gladstone Institutes, University of California, Berkeley
- SCSteven C. Lawlor
University of California, San Francisco, Gladstone Institutes
Topics & keywords
- Gene ontology
- Biology
- Gene
- Ontology
- Gene expression
- Computational biology
- Gene expression profiling
- Microarray analysis techniques