articleMolecular Biology and EvolutionAug 16, 2013HYBRID OA

MitoFish and MitoAnnotator: A Mitochondrial Genome Database of Fish with an Accurate and Automatic Annotation Pipeline

The University of Tokyo · National Museum of Nature and Science · +1 more institution

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Abstract

Mitofish is a database of fish mitochondrial genomes (mitogenomes) that includes powerful and precise de novo annotations for mitogenome sequences. Fish occupy an important position in the evolution of vertebrates and the ecology of the hydrosphere, and mitogenomic sequence data have served as a rich source of information for resolving fish phylogenies and identifying new fish species. The importance of a mitogenomic database continues to grow at a rapid pace as massive amounts of mitogenomic data are generated with the advent of new sequencing technologies. A severe bottleneck seems likely to occur with regard to mitogenome annotation because of the overwhelming pace of data accumulation and the intrinsic…

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Authors

11

Topics & keywords

Keywords
  • Biology
  • Annotation
  • Pipeline (software)
  • Genome
  • Pace
  • Evolutionary biology
  • Database
  • Computational biology
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