articleNucleic Acids ResearchAug 3, 2004GREEN OA

An efficient one-step site-directed and site-saturation mutagenesis protocol

University of Bern

PubMed
Indexed incrossrefdoajpubmed

Abstract

We have developed a new primer design method based on the QuickChange site-directed mutagenesis protocol, which significantly improves the PCR amplification efficiency. This design method minimizes primer dimerization and ensures the priority of primer-template annealing over primer self-pairing during the PCR. Several different multiple mutations (up to 7 bases) were successfully performed with this partial overlapping primer design in a variety of vectors ranging from 4 to 12 kb in length. In comparison, all attempts failed when using complete-overlapping primer pairs as recommended in the standard QuickChange protocol. Our protocol was further extended to site-saturation mutagenesis by introducing…

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Topics & keywords

Keywords
  • Saturated mutagenesis
  • Biology
  • Primer (cosmetics)
  • Computational biology
  • Genetics
  • Primer dimer
  • Site-directed mutagenesis
  • Base pair
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