articleGenome ResearchOct 3, 2013BRONZE OA

Characterizing the genetic basis of transcriptome diversity through RNA-sequencing of 922 individuals

Stanford University · University of Iowa Hospitals and Clinics · +8 more institutions

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Abstract

Understanding the consequences of regulatory variation in the human genome remains a major challenge, with important implications for understanding gene regulation and interpreting the many disease-risk variants that fall outside of protein-coding regions. Here, we provide a direct window into the regulatory consequences of genetic variation by sequencing RNA from 922 genotyped individuals. We present a comprehensive description of the distribution of regulatory variation--by the specific expression phenotypes altered, the properties of affected genes, and the genomic characteristics of regulatory variants. We detect variants influencing expression of over ten thousand genes, and through the enhanced…

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Authors

14

Topics & keywords

Keywords
  • Biology
  • Transcriptome
  • Genetics
  • RNA-Seq
  • Computational biology
  • Diversity (politics)
  • Genetic diversity
  • RNA
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