articleNucleic Acids ResearchOct 19, 2015GOLD OA

Expression Atlas update—an integrated database of gene and protein expression in humans, animals and plants

European Bioinformatics Institute · Wellcome Sanger Institute · +1 more institution

PubMed
Indexed incrossrefdoajpubmed

Abstract

Expression Atlas (http://www.ebi.ac.uk/gxa) provides information about gene and protein expression in animal and plant samples of different cell types, organism parts, developmental stages, diseases and other conditions. It consists of selected microarray and RNA-sequencing studies from ArrayExpress, which have been manually curated, annotated with ontology terms, checked for high quality and processed using standardised analysis methods. Since the last update, Atlas has grown seven-fold (1572 studies as of August 2015), and incorporates baseline expression profiles of tissues from Human Protein Atlas, GTEx and FANTOM5, and of cancer cell lines from ENCODE, CCLE and Genentech projects. Plant studies constitute…

Citation impact

563
total citations
FWCI
35.32
Percentile
100%
References
35
Citations per year

Authors

24

Topics & keywords

Keywords
  • Biology
  • Human Protein Atlas
  • Gene expression profiling
  • Computational biology
  • Gene expression
  • Gene
  • Transcriptome
  • Atlas (anatomy)
No related works found for this paper.

Funding