Escaping free-energy minima

CSCS - Swiss National Supercomputing Centre

PubMed
Indexed inarxivcrossrefpubmed

Abstract

We introduce a powerful method for exploring the properties of the multidimensional free energy surfaces (FESs) of complex many-body systems by means of coarse-grained non-Markovian dynamics in the space defined by a few collective coordinates. A characteristic feature of these dynamics is the presence of a history-dependent potential term that, in time, fills the minima in the FES, allowing the efficient exploration and accurate determination of the FES as a function of the collective coordinates. We demonstrate the usefulness of this approach in the case of the dissociation of a NaCl molecule in water and in the study of the conformational changes of a dialanine in solution.

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5,692
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FWCI
23.26
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100%
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22
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Authors

2

Topics & keywords

Keywords
  • Maxima and minima
  • Potential energy
  • Statistical physics
  • Biological system
  • Dissociation (chemistry)
  • Computer science
  • Computational chemistry
  • Physics
UN Sustainable Development Goals
  • Affordable and clean energy
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