articleGenome ResearchOct 1, 2002BRONZE OA

The Bioperl Toolkit: Perl Modules for the Life Sciences

Duke University · Plant Biotechnology Institute · +10 more institutions

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Abstract

The Bioperl project is an international open-source collaboration of biologists, bioinformaticians, and computer scientists that has evolved over the past 7 yr into the most comprehensive library of Perl modules available for managing and manipulating life-science information. Bioperl provides an easy-to-use, stable, and consistent programming interface for bioinformatics application programmers. The Bioperl modules have been successfully and repeatedly used to reduce otherwise complex tasks to only a few lines of code. The Bioperl object model has been proven to be flexible enough to support enterprise-level applications such as EnsEMBL, while maintaining an easy learning curve for novice Perl programmers.…

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Authors

21

Topics & keywords

Keywords
  • Perl
  • Computer science
  • Python (programming language)
  • Scripting language
  • Interoperation
  • Programming language
  • Structural bioinformatics
  • Java
UN Sustainable Development Goals
  • Responsible consumption and production
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