articleBioinformaticsFeb 10, 2004BRONZE OA

Open source clustering software

Tokyo University of Science · The University of Tokyo

PubMed
Indexed incrossrefdoajpubmed

Abstract

SUMMARY: We have implemented k-means clustering, hierarchical clustering and self-organizing maps in a single multipurpose open-source library of C routines, callable from other C and C++ programs. Using this library, we have created an improved version of Michael Eisen's well-known Cluster program for Windows, Mac OS X and Linux/Unix. In addition, we generated a Python and a Perl interface to the C Clustering Library, thereby combining the flexibility of a scripting language with the speed of C. AVAILABILITY: The C Clustering Library and the corresponding Python C extension module Pycluster were released under the Python License, while the Perl module Algorithm::Cluster was released under the Artistic…

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3,167
total citations
FWCI
71.22
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100%
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Citations per year

Authors

4

Topics & keywords

Keywords
  • Python (programming language)
  • Computer science
  • Perl
  • Unix
  • Operating system
  • OS X
  • Scripting language
  • Cluster analysis
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