articleProteins Structure Function and BioinformaticsApr 6, 2005Closed access

The CCPN data model for NMR spectroscopy: Development of a software pipeline

European Bioinformatics Institute · University of Cambridge · +2 more institutions

PubMed
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Abstract

To address data management and data exchange problems in the nuclear magnetic resonance (NMR) community, the Collaborative Computing Project for the NMR community (CCPN) created a "Data Model" that describes all the different types of information needed in an NMR structural study, from molecular structure and NMR parameters to coordinates. This paper describes the development of a set of software applications that use the Data Model and its associated libraries, thus validating the approach. These applications are freely available and provide a pipeline for high-throughput analysis of NMR data. Three programs work directly with the Data Model: CcpNmr Analysis, an entirely new analysis and interactive display…

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3,346
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FWCI
9.73
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100%
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Authors

10

Topics & keywords

Keywords
  • Computer science
  • Software
  • Pipeline (software)
  • Data model (GIS)
  • Data exchange
  • Data modeling
  • Software engineering
  • Data mining
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