Pseudomonas Genome Database: improved comparative analysis and population genomics capability for Pseudomonas genomes
University of British Columbia · Simon Fraser University
Abstract
Pseudomonas is a metabolically-diverse genus of bacteria known for its flexibility and leading free living to pathogenic lifestyles in a wide range of hosts. The Pseudomonas Genome Database (http://www.pseudomonas.com) integrates completely-sequenced Pseudomonas genome sequences and their annotations with genome-scale, high-precision computational predictions and manually curated annotation updates. The latest release implements an ability to view sequence polymorphisms in P. aeruginosa PAO1 versus other reference strains, incomplete genomes and single gene sequences. This aids analysis of phenotypic variation between closely related isolates and strains, as well as wider population genomics and evolutionary…
Citation impact
- FWCI
- 17.89
- Percentile
- 100%
- References
- 45
Authors
8- GLGeoffrey L. WinsorCorresponding
University of British Columbia, Simon Fraser University
- DLDaniel Lam
Simon Fraser University, University of British Columbia
- LFLouise Fleming
Simon Fraser University, University of British Columbia
- RYR Y Lo
Simon Fraser University, University of British Columbia
- MDMatthew D. Whiteside
Simon Fraser University, University of British Columbia
Topics & keywords
- Biology
- Genome
- Comparative genomics
- Genomics
- Population
- Genetics
- Computational biology
- Population genomics