fdrtool: a versatile R package for estimating local and tail area-based false discovery rates
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Abstract
UNLABELLED: False discovery rate (FDR) methodologies are essential in the study of high-dimensional genomic and proteomic data. The R package 'fdrtool' facilitates such analyses by offering a comprehensive set of procedures for FDR estimation. Its distinctive features include: (i) many different types of test statistics are allowed as input data, such as P-values, z-scores, correlations and t-scores; (ii) simultaneously, both local FDR and tail area-based FDR values are estimated for all test statistics and (iii) empirical null models are fit where possible, thereby taking account of potential over- or underdispersion of the theoretical null. In addition, 'fdrtool' provides readily interpretable graphical…
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Topics
Keywords
- False discovery rate
- R package
- Multiple comparisons problem
- Computer science
- Null (SQL)
- Data mining
- Null hypothesis
- Set (abstract data type)
UN Sustainable Development Goals
- Partnerships for the goals
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