articleCold Spring Harbor ProtocolsApr 13, 2015BRONZE OA

RNA Sequencing and Analysis

Stanford University

PubMed
Indexed incrossrefpubmed

Abstract

RNA sequencing (RNA-Seq) uses the capabilities of high-throughput sequencing methods to provide insight into the transcriptome of a cell. Compared to previous Sanger sequencing- and microarray-based methods, RNA-Seq provides far higher coverage and greater resolution of the dynamic nature of the transcriptome. Beyond quantifying gene expression, the data generated by RNA-Seq facilitate the discovery of novel transcripts, identification of alternatively spliced genes, and detection of allele-specific expression. Recent advances in the RNA-Seq workflow, from sample preparation to library construction to data analysis, have enabled researchers to further elucidate the functional complexity of the transcription.…

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Authors

2

Topics & keywords

Keywords
  • RNA
  • RNA-Seq
  • Computational biology
  • Transcriptome
  • Polyadenylation
  • Biology
  • Non-coding RNA
  • microRNA
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