articleProceedings of the National Academy of SciencesDec 7, 2015Closed access

Human cerebral organoids recapitulate gene expression programs of fetal neocortex development

Max Planck Institute for Evolutionary Anthropology · Max Planck Institute of Molecular Cell Biology and Genetics · +8 more institutions

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Abstract

Cerebral organoids-3D cultures of human cerebral tissue derived from pluripotent stem cells-have emerged as models of human cortical development. However, the extent to which in vitro organoid systems recapitulate neural progenitor cell proliferation and neuronal differentiation programs observed in vivo remains unclear. Here we use single-cell RNA sequencing (scRNA-seq) to dissect and compare cell composition and progenitor-to-neuron lineage relationships in human cerebral organoids and fetal neocortex. Covariation network analysis using the fetal neocortex data reveals known and previously unidentified interactions among genes central to neural progenitor proliferation and neuronal differentiation. In the…

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