articleNucleic Acids ResearchOct 19, 2015GOLD OA

BindingDB in 2015: A public database for medicinal chemistry, computational chemistry and systems pharmacology

University of California San Diego · University of Montana

PubMed
Indexed incrossrefdoajpubmed

Abstract

BindingDB, www.bindingdb.org, is a publicly accessible database of experimental protein-small molecule interaction data. Its collection of over a million data entries derives primarily from scientific articles and, increasingly, US patents. BindingDB provides many ways to browse and search for data of interest, including an advanced search tool, which can cross searches of multiple query types, including text, chemical structure, protein sequence and numerical affinities. The PDB and PubMed provide links to data in BindingDB, and vice versa; and BindingDB provides links to pathway information, the ZINC catalog of available compounds, and other resources. The BindingDB website offers specialized tools that take…

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