Real-time, portable genome sequencing for Ebola surveillance

Quick, Joshua; Loman, Nicholas J.; Duraffour, Sophie; Simpson, Jared T.; Severi, Ettore; Cowley, Lauren A.; Boré, Joseph Akoi; Koundouno, Raymond; Dudas, Gytis; Mikhail, Amy; Ouédraogo, Nobila; Afrough, Babak; Bah, Amadou; Baum, Jonathan H. J.; Becker‐Ziaja, Beate; Boettcher, Jan Peter; Cabeza-Cabrerizo, Mar; Camino-Sánchez, Álvaro; Carter, Lisa L.; Doerrbecker, Juliane; Enkirch, Theresa; García-Dorival, Isabel; Hetzelt, Nicole; Hinzmann, Julia; Holm, Tobias; Kafetzopoulou, Liana E.; Koropogui, Michel; Kosgey, Abigael; Kuisma, Eeva; Logue, Christopher H.; Mazzarelli, Antonio; Meisel, Sarah; Mertens, Marc; Michel, Janine; Ngabo, Didier; Nitzsche, Katja; Pallasch, Elisa; Patrono, Livia Victoria; Portmann, Jasmine; Repits, Johanna; Rickett, Natasha Y.; Sachse, Andreas; Singethan, Katrin; Vitoriano, Inês; Yemanaberhan, Rahel L.; Zekeng, Elsa Gayle; Racine, Trina; Bello, Alexander; Sall, Amadou Alpha; Faye, Ousmane; Faye, Oumar; Magassouba, N’Faly; Williams, C.V.; Amburgey, Victoria; Winona, Linda; Davis, Emily; Gerlach, Jon; -Washington, F Clarke; Monteil, Vanessa; Jourdain, Marine; Bererd, Marion; Camara, Alimou; Somlaré, Hermann; Camara, Abdoulaye; Gérard, Marianne; Bado, Guillaume; Baillet, Bernard; Delaune, Déborah; Nebié, Koumpingnin; Diarra, Abdoulaye; Savane, Yacouba; Pallawo, Raymond; Gutierrez, Giovanna Jaramillo; Milhano, Natacha; Roger, Isabelle; Williams, Christopher J.; Yattara, Facinet; Lewandowski, Kuiama; Taylor, James G.; Rachwal, Phillip A.; Turner, Daniel J.; Pollakis, Georgios; Hiscox, Julian A.; Matthews, David A.; Shea, Matthew K. O’; Johnston, Andrew; Wilson, Duncan; Hutley, Emma; Smit, Erasmus; Di, Antonino; Wölfel, Roman; Stoecker, Kilian; Fleischmann, Erna; Gabriel, Martin; Weller, Simon A.; Koivogui, Lamine; Diallo, Boubacar; Keïta, Sakoba; Rambaut, Andrew; Formenty, Pierre; Günther, Stephan; Carroll, Miles W.

doi:10.1038/nature16996

articleNatureFeb 1, 2016GREEN OA

Real-time, portable genome sequencing for Ebola surveillance

JQJoshua Quick NJNicholas J. Loman SDSophie Duraffour JTJared T. Simpson ESEttore Severi

University of Birmingham · Bernhard Nocht Institute for Tropical Medicine · +38 more institutions

PubMed

Indexed incrossrefpubmed

Abstract

No abstract available for this paper.

Citation impact

1,545

total citations

FWCI: 133.11
Percentile: 100%
References: 32

Citations per year

Authors

102

JQ
Joshua QuickCorresponding
University of Birmingham
NJ
Nicholas J. Loman
University of Birmingham
SD
Sophie Duraffour
Bernhard Nocht Institute for Tropical Medicine
JT
Jared T. Simpson
Ontario Institute for Cancer Research, University of Toronto
ES
Ettore Severi
European Centre for Disease Prevention and Control

Topics & keywords

Topics

Viral Infections and Outbreaks Research100%
Bacteriophages and microbial interactions99%
Vibrio bacteria research studies98%

Keywords

Ebola virus
Genome
Biology
DNA sequencing
Ebolavirus
Whole genome sequencing
Nanopore sequencing
Genomics

UN Sustainable Development Goals

Good health and well-being

No related works found for this paper.

Funding

ON
Oxford Nanopore Technologies
PH
Public Health Agency of Canada
GO
Government of Ontario
NI
National Institute for Health and Care Research
Awards: 278433-PREDEMICS, FP7/2007-2013
EC
European Commission
Awards: 278433, 260864, FP7/2007-2013, 278433-PREDEMICS, 666100, 2007-2013, FP7/2007
PH
Public Health Agency
AU
African Union
SR
Surgical Reconstruction and Microbiology Research Centre
DS
Defence Science and Technology Laboratory
MR
Medical Research Council
Awards: MR/M501621/1, MR/J014370/1, MR/L015080/1
DF
Directorate-General for International Cooperation and Development