articleIEEE Transactions on Medical ImagingMar 30, 2016GREEN OA

Automatic Segmentation of MR Brain Images With a Convolutional Neural Network

PMPim MoeskopsMAMax A. ViergeverAMAdrienne M. MendrikLSLinda S. de VriesMJManon J. N. L. Benders

University Medical Center Utrecht

PubMed
Indexed inarxivcrossrefpubmed

Abstract

Automatic segmentation in MR brain images is important for quantitative analysis in large-scale studies with images acquired at all ages. This paper presents a method for the automatic segmentation of MR brain images into a number of tissue classes using a convolutional neural network. To ensure that the method obtains accurate segmentation details as well as spatial consistency, the network uses multiple patch sizes and multiple convolution kernel sizes to acquire multi-scale information about each voxel. The method is not dependent on explicit features, but learns to recognise the information that is important for the classification based on training data. The method requires a single anatomical MR image…

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775
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Authors

6
  • PM
    Pim MoeskopsCorresponding

    University Medical Center Utrecht

  • MA
    Max A. Viergever

    University Medical Center Utrecht

  • AM
    Adrienne M. Mendrik

    University Medical Center Utrecht

  • LS
    Linda S. de Vries

    University Medical Center Utrecht

  • MJ
    Manon J. N. L. Benders

    University Medical Center Utrecht

Topics & keywords

Keywords
  • Segmentation
  • Convolutional neural network
  • Pattern recognition (psychology)
  • Image segmentation
  • Robustness (evolution)
  • Kernel (algebra)
  • Convolution (computer science)
  • Artificial neural network
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