articleNucleic Acids ResearchMay 3, 2016GOLD OA

Enrichr: a comprehensive gene set enrichment analysis web server 2016 update

MVMaxim V. KuleshovMRMatthew R. JonesADAndrew D. RouillardNFNicolas FernandezQDQiaonan Duan

Icahn School of Medicine at Mount Sinai · Glenn Research Center

PubMed
Indexed incrossrefdoajpubmed

Abstract

Enrichment analysis is a popular method for analyzing gene sets generated by genome-wide experiments. Here we present a significant update to one of the tools in this domain called Enrichr. Enrichr currently contains a large collection of diverse gene set libraries available for analysis and download. In total, Enrichr currently contains 180 184 annotated gene sets from 102 gene set libraries. New features have been added to Enrichr including the ability to submit fuzzy sets, upload BED files, improved application programming interface and visualization of the results as clustergrams. Overall, Enrichr is a comprehensive resource for curated gene sets and a search engine that accumulates biological knowledge…

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Topics & keywords

Topics
Keywords
  • Upload
  • Biology
  • Set (abstract data type)
  • Web server
  • Interface (matter)
  • Visualization
  • Computational biology
  • Gene
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