articleNucleic Acids ResearchMay 12, 2016GOLD OA

tRNAscan-SE On-line: integrating search and context for analysis of transfer RNA genes

University of California, Santa Cruz

PubMed
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Abstract

High-throughput genome sequencing continues to grow the need for rapid, accurate genome annotation and tRNA genes constitute the largest family of essential, ever-present non-coding RNA genes. Newly developed tRNAscan-SE 2.0 has advanced the state-of-the-art methodology in tRNA gene detection and functional prediction, captured by rich new content of the companion Genomic tRNA Database. Previously, web-server tRNA detection was isolated from knowledge of existing tRNAs and their annotation. In this update of the tRNAscan-SE On-line resource, we tie together improvements in tRNA classification with greatly enhanced biological context via dynamically generated links between web server search results, the most…

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Authors

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Topics & keywords

Keywords
  • Biology
  • Transfer RNA
  • Genome browser
  • Genome
  • Annotation
  • Gene Annotation
  • Gene
  • Context (archaeology)
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