Improved Bacterial 16S rRNA Gene (V4 and V4-5) and Fungal Internal Transcribed Spacer Marker Gene Primers for Microbial Community Surveys
Cornell University · University of California San Diego · +9 more institutions
Abstract
We continue to uncover a wealth of information connecting microbes in important ways to human and environmental ecology. As our scientific knowledge and technical abilities improve, the tools used for microbiome surveys can be modified to improve the accuracy of our techniques, ensuring that we can continue to identify groundbreaking connections between microbes and the ecosystems they populate, from ice caps to the human body. It is important to confirm that modifications to these tools do not cause new, detrimental biases that would inhibit the field rather than continue to move it forward. We therefore demonstrated that two recently modified primer pairs that target taxonomically discriminatory regions of…
Citation impact
- FWCI
- 44.40
- Percentile
- 100%
- References
- 21
Authors
12Topics & keywords
- Amplicon
- Biology
- Primer (cosmetics)
- Internal transcribed spacer
- Genetics
- 16S ribosomal RNA
- Computational biology
- Ribosomal RNA
Funding
- NSNational Science FoundationAwards: OCE-1233612, 1136818, 1233612, DE-AC02-06CH11357, 76RL01830
- HHHoward Hughes Medical Institute
- UDU.S. Department of EnergyAwards: 76RL01830, AC02-06CH11357, DE-AC06-76RLO1830, DE-AC02, 06CH11357, DE-AC06-76RL01830, DE-AC02-06CH11357, DE-AC02-
- APAlfred P. Sloan Foundation
- GAGordon and Betty Moore FoundationAward: GMBF3779
- BBattelleAwards: DE-AC02-06CH11357, DE-AC06-76RL01830
- LDLaboratory Directed Research and DevelopmentAwards: 76RL01830, DE-AC02-06CH11357
- PNPacific Northwest National LaboratoryAwards: DE-AC02-06CH11357, 76RL01830, DE-AC06-76RL01830