iNEXT: an R package for rarefaction and extrapolation of species diversity ( H ill numbers)

Summary Hill numbers (or the effective number of species) have been increasingly used to quantify the species/taxonomic diversity of an assemblage. The sample‐size‐ and coverage‐based integrations of rarefaction (interpolation) and extrapolation (prediction) of H ill numbers represent a unified standardization method for quantifying and comparing species diversity across multiple assemblages. We briefly review the conceptual background of H ill numbers along with two approaches to standardization. We present an R package iNEXT (i N terpolation/ EXT rapolation) which provides simple functions to compute and plot the seamless rarefaction and extrapolation sampling curves for the three most widely used members of…

• MO
  Ministry of Science and Technology, Taiwan

  Award: 103‐2628‐M007‐007