articleNucleic Acids ResearchOct 14, 2016GOLD OA

HIPPIE v2.0: enhancing meaningfulness and reliability of protein–protein interaction networks

Institute of Molecular Biology · Johannes Gutenberg University Mainz · +2 more institutions

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Abstract

The increasing number of experimentally detected interactions between proteins makes it difficult for researchers to extract the interactions relevant for specific biological processes or diseases. This makes it necessary to accompany the large-scale detection of protein-protein interactions (PPIs) with strategies and tools to generate meaningful PPI subnetworks. To this end, we generated the Human Integrated Protein-Protein Interaction rEference or HIPPIE (http://cbdm.uni-mainz.de/hippie/). HIPPIE is a one-stop resource for the generation and interpretation of PPI networks relevant to a specific research question. We provide means to generate highly reliable, context-specific PPI networks and to make sense…

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