Hand classification of fMRI ICA noise components
University of Oxford · Wellcome Centre for Integrative Neuroimaging · +6 more institutions
Abstract
We present a practical "how-to" guide to help determine whether single-subject fMRI independent components (ICs) characterise structured noise or not. Manual identification of signal and noise after ICA decomposition is required for efficient data denoising: to train supervised algorithms, to check the results of unsupervised ones or to manually clean the data. In this paper we describe the main spatial and temporal features of ICs and provide general guidelines on how to evaluate these. Examples of signal and noise components are provided from a wide range of datasets (3T data, including examples from the UK Biobank and the Human Connectome Project, and 7T data), together with practical guidelines for their…
Citation impact
- FWCI
- 19.17
- Percentile
- 100%
- References
- 69
Authors
12- LGLudovica GriffantiCorresponding
University of Oxford, Wellcome Centre for Integrative Neuroimaging
- GDGwenaëlle Douaud
University of Oxford, Wellcome Centre for Integrative Neuroimaging
- JBJanine Bijsterbosch
Wellcome Centre for Integrative Neuroimaging, University of Oxford
- SEStefania Evangelisti
Policlinico S.Orsola-Malpighi, Wellcome Centre for Integrative Neuroimaging, University of Bologna, University of Oxford
- FAFidel Alfaro‐Almagro
University of Oxford, Wellcome Centre for Integrative Neuroimaging
Topics & keywords
- Independent component analysis
- Noise (video)
- Pattern recognition (psychology)
- Artificial intelligence
- Computer science
- Psychology
- Speech recognition
Funding
- WTWellcome TrustAwards: 1U54MH091657, MR/K006673/1, 098369/Z/12/Z
- NINational Institute for Health and Care ResearchAward: MR/K006673/1
- UOUniversity of Oxford
- NONederlandse Organisatie voor Wetenschappelijk OnderzoekAwards: 864-12-003, NWO-Vidi 864-12-003, 1U54MH091657, NWO-Vidi 864-12
- NINational Institutes of HealthAward: 1U54MH091657
- MCMcDonnell Center for Systems NeuroscienceAward: 1U54MH091657
- MRMedical Research CouncilAwards: MR/K006673/1, MR/M024962/1, 098369/Z/12/Z, 1U54MH091657, MR/K006673/1, MC_EX_MR/N50192X/1, MR/L023784/1
- NBNIH Blueprint for Neuroscience ResearchAward: 1U54MH091657