articleProtein ScienceSep 6, 2017BRONZE OA

PDBsum: Structural summaries of PDB entries

European Bioinformatics Institute · Wellcome Trust · +3 more institutions

PubMed
Indexed incrossrefdatacitepubmed

Abstract

PDBsum is a web server providing structural information on the entries in the Protein Data Bank (PDB). The analyses are primarily image-based and include protein secondary structure, protein-ligand and protein-DNA interactions, PROCHECK analyses of structural quality, and many others. The 3D structures can be viewed interactively in RasMol, PyMOL, and a JavaScript viewer called 3Dmol.js. Users can upload their own PDB files and obtain a set of password-protected PDBsum analyses for each. The server is freely accessible to all at: http://www.ebi.ac.uk/pdbsum.

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