MethSurv: A Web Tool to Perform Multivariable Survival Analysis Using DNA Methylation Data
University of Tartu · Tartu University Hospital · +2 more institutions
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Abstract
Aim
To develop a web tool for survival analysis based on CpG methylation patterns. MATERIALS & METHODS: We utilized methylome data from 'The Cancer Genome Atlas' and used the Cox proportional-hazards model to develop an interactive web interface for survival analysis.
Results
MethSurv enables survival analysis for a CpG located in or around the proximity of a query gene. For further mining, cluster analysis for a query gene to associate methylation patterns with clinical characteristics and browsing of top biomarkers for each cancer type are provided. MethSurv includes 7358 methylomes from 25 different human cancers.
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735
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- 7.74
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Authors
6Topics & keywords
Topics
Keywords
- Biology
- DNA methylation
- Computational biology
- Methylation
- Genetics
- Bioinformatics
- DNA
- Gene
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