articleJournal of The Royal Society InterfaceSep 1, 2017BRONZE OA

The coefficient of determination R 2 and intra-class correlation coefficient from generalized linear mixed-effects models revisited and expanded

Garvan Institute of Medical Research · UNSW Sydney · +2 more institutions

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Abstract

The coefficient of determination R 2 quantifies the proportion of variance explained by a statistical model and is an important summary statistic of biological interest. However, estimating R 2 for generalized linear mixed models (GLMMs) remains challenging. We have previously introduced a version of R 2 that we called for Poisson and binomial GLMMs, but not for other distributional families. Similarly, we earlier discussed how to estimate intra-class correlation coefficients (ICCs) using Poisson and binomial GLMMs. In this paper, we generalize our methods to all other non-Gaussian distributions, in particular to negative binomial and gamma distributions that are commonly used for modelling biological data.…

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Topics & keywords

Keywords
  • Mathematics
  • Generalized linear mixed model
  • Poisson distribution
  • Negative binomial distribution
  • Count data
  • Quasi-likelihood
  • Applied mathematics
  • Generalized linear model
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