PhyloSuite: An integrated and scalable desktop platform for streamlined molecular sequence data management and evolutionary phylogenetics studies
Chinese Academy of Sciences · Institute of Hydrobiology · +4 more institutions
Abstract
Multigene and genomic data sets have become commonplace in the field of phylogenetics, but many existing tools are not designed for such data sets, which often makes the analysis time-consuming and tedious. Here, we present PhyloSuite, a (cross-platform, open-source, stand-alone Python graphical user interface) user-friendly workflow desktop platform dedicated to streamlining molecular sequence data management and evolutionary phylogenetics studies. It uses a plugin-based system that integrates several phylogenetic and bioinformatic tools, thereby streamlining the entire procedure, from data acquisition to phylogenetic tree annotation (in combination with iTOL). It has the following features: (a)…
Citation impact
- FWCI
- 104.07
- Percentile
- 100%
- References
- 28
Authors
7- DZDong Zhang
Chinese Academy of Sciences, Institute of Hydrobiology, University of Chinese Academy of Sciences, State Key Laboratory of Freshwater Ecology and Biotechnology
- FGFangluan Gao
Fujian Agriculture and Forestry University
- IJIvan Jakovlić
Wuhan Institute of Bioengineering
- HZHong Zou
Chinese Academy of Sciences, Institute of Hydrobiology, State Key Laboratory of Freshwater Ecology and Biotechnology
- JZJin Zhang
Wuhan Institute of Bioengineering
Topics & keywords
- Biology
- Phylogenetics
- Scalability
- Sequence (biology)
- Evolutionary biology
- Computational biology
- Data science
- Bioinformatics