One thousand plant transcriptomes and the phylogenomics of green plants
OTOne Thousand Plant Transcriptomes Initiative
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Abstract
Of great diversity and have important roles in terrestrial and aquatic ecosystems. Here, as part of the One Thousand Plant Transcriptomes Initiative, we sequenced the vegetative transcriptomes of 1,124 species that span the diversity of plants in a broad sense (Archaeplastida), including green plants (Viridiplantae), glaucophytes (Glaucophyta) and red algae (Rhodophyta). Our analysis provides a robust phylogenomic framework for examining the evolution of green plants. Most inferred species relationships are well supported across multiple species tree and supermatrix analyses, but discordance among plastid and nuclear gene trees at a few important nodes highlights the complexity of plant genome evolution,…
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1,797
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- FWCI
- 81.26
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- 100%
- References
- 111
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Authors
1- OTOne Thousand Plant Transcriptomes InitiativeCorresponding
University of New Caledonia
Topics & keywords
Topics
Keywords
- Phylogenomics
- Biology
- Plant evolution
- Lineage (genetic)
- Evolutionary biology
- Genome
- Plastid
- Coalescent theory
UN Sustainable Development Goals
- Life in Land
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Funding
- NSNational Science FoundationAwards: 0629817, 1265383, DEB 0830009, 0830009, EF-0629817, 1062335, IOS-1339156, 0733029, 1550838, 1339156, 0922742, EF-1550838
- CCCompute Canada
- WCWestern Canada Research Grid
- AIAlberta Innovates - Technology FuturesAward: RES0010334
- SRSight Research UKAwards: NE/S009663/1, NE/N00941X/1
- DFDeutsche ForschungsgemeinschaftAwards: GR 3526/8, Qu 141/5-1, Qu 141/6-1, GR 3526/7-1, GR 3526/8-1
- MOMinistry of Science and Technology of the People's Republic of ChinaAwards: 2015BAD04B01, 2016YFE0122000, 2015BAD04B03
- GOGovernment of Jiangxi Province
- MOMinistry of Advanced Education
- AIAlberta InnovatesAward: RES0010334
- NINational Institutes of Health
- NSNatural Sciences and Engineering Research Council of Canada
- BABiotechnology and Biological Sciences Research CouncilAwards: BB/L002957/1, BB/I013164/1, BB/M026825/1
- NENatural Environment Research CouncilAwards: NE/S009663/1, NE/N00941X/1
- NKNational Key Research and Development Program of ChinaAward: 2016YFE0122000